Omid Shams Solari, Ph.D.
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    • AntigenBinder: An End-To-End Framework for Neo-Antigen Immunogenicity Likelihood Estimation
    • Cell-Type Decomposition Via Robust Non-Negative Matrix Factorization
    • XPLoRA: Robust Low-Rank Adaptation of LLMs via Regularized Power Method
    • BayesBreak
    • PostMoDisco: A Semi-Supervised Multi-Modal U-Transformer Model for In-Silico Prediction of Post-Translational Modifications
    • Circulating differential methylation allele fraction (DMAF) strongly correlates with circulating tumor DNA (ctDNA) variant allele fraction (VAF)
    • Comparison of colorectal cancer (CRC) characteristics across genetic ancestries: Implications for early cancer detection (ECD).
    • Comprehensive analysis of differentially methylated regions in colorectal cancer (CRC).
    • Sa1175 COMPARISON OF COLORECTAL CANCER (CRC) CHARACTERISTICS ACROSS GENETIC ANCESTRIES: IMPLICATIONS FOR EARLY CANCER DETECTION
    • example:
    • Tail Probability Estimation of Factor Models with Regularly-Varying Tails: Asymptotics and Efficient Estimation
    • Cell-free DNA fragments inform epigenomic mechanisms for early detection of breast cancer
    • BLOCCS: Block Sparse Canonical Correlation Analysis With Application To Interpretable Omics Integration
    • BLOCCS: Block Sparse Canonical Correlation Analysis With Application To Interpretable Omics Integration
    • Exploiting regulatory heterogeneity to systematically identify enhancers with high accuracy
    • Large Deviations of Linear Models with Regularly-Varying Tails: Asymptotics and Efficient Estimation
    • Large-Scale Interpretable Multi-View Learning for Very High-Dimensional Problems with
    • Large-Scale Interpretable Multi-View Learning for Very High-Dimensional Problems with Application to Multi-Omic Data
    • Sparse canonical correlation analysis via concave minimization
    • Early transcriptional response pathways in Daphnia magna are coordinated in networks of crustacean-specific genes
    • Pattern of DNA methylation in Daphnia: evolutionary perspective
    • Daphnia magna transcriptome by RNA-Seq across 12 environmental stressors
    • example
  • Blog
    • Self-Attention vs Cross-Attention
    • Low-Rank Adaptation
    • Inferring Age From Epigenetic Data
    • MethylSuite
    • U-GAN
    • 👩🏼‍🏫 Teach academic courses
    • Protein Language Models
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Deep Learning

Oct 26, 2023 · 1 min read
Go to Project Site

Pytorch Lightning implementation of well-known neural network structures.

Last updated on Oct 26, 2023
Deep Learning AI
Omid Shams Solari
Authors
Omid Shams Solari
Lead AI Research Scientist
Machine Learning From Scratch Oct 26, 2023 →

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